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update a lot, take a break

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2024-07-12 07:47:33 +08:00
parent 58c56ab2ab
commit 99b8f7fd90
11 changed files with 2161 additions and 2418 deletions
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103
examples/interpret_visualize/.ipynb_checkpoints/visualize_genome-checkpoint.ipynb Normal file
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examples/interpret_visualize/network.svg
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examples/interpret_visualize/visualize_genome.ipynb
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examples/interpret_visualize/visualize_genome.py
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@@ -1,13 +1,9 @@
import networkx as nx
import matplotlib.pyplot as plt
# 创建一个空白的有向图
G = nx.DiGraph()
# 添加边
G.add_edge('A', 'B')
G.add_edge('A', 'C')
G.add_edge('B', 'C')
G.add_edge('C', 'D')
# 绘制有向图
h = np.zeros(3)
o = np.zeros(4)
h[0] = -tanh(0.540486*i[0] + 1.04397*i[1] + 0.58006*i[10] + 0.658223*i[11] - 0.9918*i[12] - 0.01919*i[13] + 0.194062*i[14] + 0.903314*i[15] - 1.906567*i[2] - 1.666336*i[3] + 0.653257*i[4] + 0.580191*i[5] + 0.177264*i[6] + 0.830688*i[7] - 0.855676*i[8] + 0.326538*i[9] + 2.465507)
h[1] = -tanh(1.441044*i[0] - 0.606109*i[1] - 0.736058*i[10] + 0.60264*i[11] - 0.837565*i[12] + 2.018719*i[13] + 0.327097*i[14] + 0.098963*i[15] + 0.403485*i[2] - 0.680547*i[3] + 0.349021*i[4] - 1.359364*i[5] + 0.351466*i[6] + 0.450447*i[7] + 2.102749*i[8] + 0.680605*i[9] + 0.593945)
h[2] = -tanh(1.350645*i[0] - 0.281682*i[1] + 0.332992*i[10] + 0.703457*i[11] + 1.290286*i[12] - 1.059887*i[13] - 1.114513*i[14] + 0.446127*i[15] + 1.103008*i[2] + 1.080698*i[3] - 0.89471*i[4] + 0.103146*i[5] - 0.828767*i[6] + 0.609362*i[7] - 0.765917*i[8] + 0.047898*i[9] + 0.649254)
o[0] = -1.307307*h[0] - 0.985838*h[1] - 0.746408*h[2] + 0.245725
o[1] = 0.64947*h[0] + 2.865669*h[1] + 1.185759*h[2] - 1.347174
o[2] = 2.030407*h[0] + 1.001914*h[1] - 1.041287*h[2] + 0.301639
o[3] = 0.717661*h[0] + 0.653905*h[1] - 1.387949*h[2] - 1.200779