Add CustomFuncFit into problem; Add related examples
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@@ -1,3 +1,4 @@
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from .func_fit import FuncFit
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from .xor import XOR
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from .xor3d import XOR3d
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from .custom import CustomFuncFit
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119
tensorneat/problem/func_fit/custom.py
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119
tensorneat/problem/func_fit/custom.py
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@@ -0,0 +1,119 @@
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from typing import Callable, Union, List, Tuple, Sequence
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import jax
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from jax import vmap, Array, numpy as jnp
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import numpy as np
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from .func_fit import FuncFit
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class CustomFuncFit(FuncFit):
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def __init__(
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self,
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func: Callable,
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low_bounds: Union[List, Tuple, Array],
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upper_bounds: Union[List, Tuple, Array],
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method: str = "sample",
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num_samples: int = 100,
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step_size: Array = None,
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*args,
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**kwargs,
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):
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if isinstance(low_bounds, list) or isinstance(low_bounds, tuple):
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low_bounds = np.array(low_bounds, dtype=np.float32)
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if isinstance(upper_bounds, list) or isinstance(upper_bounds, tuple):
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upper_bounds = np.array(upper_bounds, dtype=np.float32)
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try:
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out = func(low_bounds)
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except Exception as e:
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raise ValueError(f"func(low_bounds) raise an exception: {e}")
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assert low_bounds.shape == upper_bounds.shape
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assert method in {"sample", "grid"}
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self.func = func
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self.low_bounds = low_bounds
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self.upper_bounds = upper_bounds
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self.method = method
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self.num_samples = num_samples
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self.step_size = step_size
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self.generate_dataset()
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super().__init__(*args, **kwargs)
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def generate_dataset(self):
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if self.method == "sample":
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assert (
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self.num_samples > 0
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), f"num_samples must be positive, got {self.num_samples}"
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inputs = np.zeros(
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(self.num_samples, self.low_bounds.shape[0]), dtype=np.float32
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)
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for i in range(self.low_bounds.shape[0]):
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inputs[:, i] = np.random.uniform(
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low=self.low_bounds[i],
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high=self.upper_bounds[i],
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size=(self.num_samples,),
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)
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elif self.method == "grid":
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assert (
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self.step_size is not None
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), "step_size must be provided when method is 'grid'"
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assert (
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self.step_size.shape == self.low_bounds.shape
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), "step_size must have the same shape as low_bounds"
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assert np.all(self.step_size > 0), "step_size must be positive"
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inputs = np.zeros((1, 1))
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for i in range(self.low_bounds.shape[0]):
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new_col = np.arange(
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self.low_bounds[i], self.upper_bounds[i], self.step_size[i]
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)
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inputs = cartesian_product(inputs, new_col[:, None])
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inputs = inputs[:, 1:]
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else:
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raise ValueError(f"Unknown method: {self.method}")
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outputs = vmap(self.func)(inputs)
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self.data_inputs = jnp.array(inputs)
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self.data_outputs = jnp.array(outputs)
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@property
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def inputs(self):
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return self.data_inputs
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@property
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def targets(self):
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return self.data_outputs
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@property
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def input_shape(self):
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return self.data_inputs.shape
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@property
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def output_shape(self):
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return self.data_outputs.shape
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def cartesian_product(arr1, arr2):
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assert (
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arr1.ndim == arr2.ndim
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), "arr1 and arr2 must have the same number of dimensions"
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assert arr1.ndim <= 2, "arr1 and arr2 must have at most 2 dimensions"
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len1 = arr1.shape[0]
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len2 = arr2.shape[0]
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repeated_arr1 = np.repeat(arr1, len2, axis=0)
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tiled_arr2 = np.tile(arr2, (len1, 1))
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new_arr = np.concatenate((repeated_arr1, tiled_arr2), axis=1)
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return new_arr
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