odify genome for the official release

2024-07-10 11:24:11 +08:00
parent 075460f896
commit ee8ec84202
83 changed files with 588 additions and 611 deletions
--- a/examples/func_fit/xor_recurrent.py
+++ b/examples/func_fit/xor_recurrent.py
@@ -0,0 +1,47 @@
+from pipeline import Pipeline
+from algorithm.neat import *
+from algorithm.neat.gene.node.default_without_response import NodeGeneWithoutResponse
+
+from problem.func_fit import XOR3d
+from utils.activation import ACT_ALL, Act
+
+if __name__ == "__main__":
+    pipeline = Pipeline(
+        seed=0,
+        algorithm=NEAT(
+            species=DefaultSpecies(
+                genome=RecurrentGenome(
+                    num_inputs=3,
+                    num_outputs=1,
+                    max_nodes=50,
+                    max_conns=100,
+                    activate_time=5,
+                    node_gene=NodeGeneWithoutResponse(
+                        activation_options=ACT_ALL, activation_replace_rate=0.2
+                    ),
+                    output_transform=Act.sigmoid,
+                    mutation=DefaultMutation(
+                        node_add=0.05,
+                        conn_add=0.2,
+                        node_delete=0,
+                        conn_delete=0,
+                    ),
+                ),
+                pop_size=10000,
+                species_size=10,
+                compatibility_threshold=3.5,
+                survival_threshold=0.03,
+            ),
+        ),
+        problem=XOR3d(),
+        generation_limit=10000,
+        fitness_target=-1e-8,
+    )
+
+    # initialize state
+    state = pipeline.setup()
+    # print(state)
+    # run until terminate
+    state, best = pipeline.auto_run(state)
+    # show result
+    pipeline.show(state, best)