import jax from jax import Array, numpy as jnp from . import BaseGene class NormalGene(BaseGene): node_attrs = ['bias', 'response', 'aggregation', 'activation'] conn_attrs = ['weight'] @staticmethod def setup(state, config): return state.update( bias_init_mean=config['bias_init_mean'], bias_init_std=config['bias_init_std'], bias_mutate_power=config['bias_mutate_power'], bias_mutate_rate=config['bias_mutate_rate'], bias_replace_rate=config['bias_replace_rate'], response_init_mean=config['response_init_mean'], response_init_std=config['response_init_std'], response_mutate_power=config['response_mutate_power'], response_mutate_rate=config['response_mutate_rate'], response_replace_rate=config['response_replace_rate'], activation_default=config['activation_default'], activation_options=config['activation_options'], activation_replace_rate=config['activation_replace_rate'], aggregation_default=config['aggregation_default'], aggregation_options=config['aggregation_options'], aggregation_replace_rate=config['aggregation_replace_rate'], weight_init_mean=config['weight_init_mean'], weight_init_std=config['weight_init_std'], weight_mutate_power=config['weight_mutate_power'], weight_mutate_rate=config['weight_mutate_rate'], weight_replace_rate=config['weight_replace_rate'], ) @staticmethod def new_node_attrs(state): return jnp.array([state.bias_init_mean, state.response_init_mean, state.activation_default, state.aggregation_default]) @staticmethod def new_conn_attrs(state): return jnp.array([state.weight_init_mean]) @staticmethod def mutate_node(state, attrs: Array, key): k1, k2, k3, k4 = jax.random.split(key, num=4) bias = NormalGene._mutate_float(k1, attrs[0], state.bias_init_mean, state.bias_init_std, state.bias_mutate_power, state.bias_mutate_rate, state.bias_replace_rate) res = NormalGene._mutate_float(k2, attrs[1], state.response_init_mean, state.response_init_std, state.response_mutate_power, state.response_mutate_rate, state.response_replace_rate) act = NormalGene._mutate_int(k3, attrs[2], state.activation_options, state.activation_replace_rate) agg = NormalGene._mutate_int(k4, attrs[3], state.aggregation_options, state.aggregation_replace_rate) return jnp.array([bias, res, act, agg]) @staticmethod def mutate_conn(state, attrs: Array, key): weight = NormalGene._mutate_float(key, attrs[0], state.weight_init_mean, state.weight_init_std, state.weight_mutate_power, state.weight_mutate_rate, state.weight_replace_rate) return jnp.array([weight]) @staticmethod def distance_node(state, array1: Array, array2: Array): # bias + response + activation + aggregation return jnp.abs(array1[1] - array2[1]) + jnp.abs(array1[2] - array2[2]) + \ (array1[3] != array2[3]) + (array1[4] != array2[4]) @staticmethod def distance_conn(state, array1: Array, array2: Array): return (array1[2] != array2[2]) + jnp.abs(array1[3] - array2[3]) # enable + weight @staticmethod def forward(state, array: Array): return array @staticmethod def _mutate_float(key, val, init_mean, init_std, mutate_power, mutate_rate, replace_rate): k1, k2, k3 = jax.random.split(key, num=3) noise = jax.random.normal(k1, ()) * mutate_power replace = jax.random.normal(k2, ()) * init_std + init_mean r = jax.random.uniform(k3, ()) val = jnp.where( r < mutate_rate, val + noise, jnp.where( (mutate_rate < r) & (r < mutate_rate + replace_rate), replace, val ) ) return val @staticmethod def _mutate_int(key, val, options, replace_rate): k1, k2 = jax.random.split(key, num=2) r = jax.random.uniform(k1, ()) val = jnp.where( r < replace_rate, jax.random.choice(k2, options), val ) return val